Lisbon-K Chromosome Dataset - Revision history

Artkhmelinskii at 18:31, 17 May 2013

2013-05-17T18:31:40Z

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	</gallery>		</gallery>


			== Authors ==

			[http://scholar.google.nl/citations?user=vAh7J4AAAAAJ&hl=en Artem Khmelinskii]

			[http://users.isr.ist.utl.pt/~yoda/homepage/ Rodrigo Ventura]

			[http://users.isr.ist.utl.pt/~jmrs/ João Sanches]

Artkhmelinskii: /* Dataset Request & Citing */

2013-05-17T18:28:09Z

Dataset Request & Citing

← Older revision		Revision as of 18:28, 17 May 2013
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	To reference the dataset in any publication describing research performed using the dataset, or sets derived from the original dataset made available here please cite the following paper, in which the dataset was first presented and made public:		To reference the dataset in any publication describing research performed using the dataset, or sets derived from the original dataset made available here please cite the following paper, in which the dataset was first presented and made public:

	*Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://~~ieeexplore~~.~~ieee~~.org/~~xpl~~/~~RecentIssue~~.~~jsp?punumber=10~~ '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010''		*Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://dx.doi.org/10.1109/TBME.2010.2040279 '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010''



	Thank you and good work!		Thank you and good work!


	== Other Chromosome Datasets ==		== Other Chromosome Datasets ==

Artkhmelinskii: /* Background & Framework */

2013-05-17T18:27:15Z

Background & Framework

← Older revision		Revision as of 18:27, 17 May 2013
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	* References:		* References:
	** [1] Rodrigo Ventura, Artem Khmelinskii and João Sanches, [http://~~ieeexplore~~.~~ieee~~.org Classifier-assisted metric for chromosome pairing], ''Proceedings of the 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 31-September 4, Buenos Aires, Argentina, 2010 Pages: 6729-6732''		** [1] Rodrigo Ventura, Artem Khmelinskii and João Sanches, [http://dx.doi.org/10.1109/IEMBS.2010.5626237 Classifier-assisted metric for chromosome pairing], ''Proceedings of the 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 31-September 4, Buenos Aires, Argentina, 2010 Pages: 6729-6732''
	** '''[2]''' Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://~~ieeexplore~~.~~ieee~~.org/~~xpl~~/~~RecentIssue~~.~~jsp?punumber=10~~ '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010''		** '''[2]''' Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://dx.doi.org/10.1109/TBME.2010.2040279 '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010''
	** [3] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://~~ieeexplore~~.~~ieee~~.org/~~xpl~~/~~mostRecentIssue~~.~~jsp?punumber=4636107~~ Automatic chromosome pairing using mutual information], ''Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 20-24, Vancouver, Canada, 2008, Pages: 1918-1921''		** [3] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://dx.doi.org/10.1109/IEMBS.2008.4649562 Automatic chromosome pairing using mutual information], ''Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 20-24, Vancouver, Canada, 2008, Pages: 1918-1921''
	** [4] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://~~ieeexplore~~.~~ieee~~.org/~~xpl~~/~~mostRecentIssue~~.~~jsp?punumber=4534844~~ Chromosome pairing for karyotyping purposes using mutual information], ''Proceedings of the 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 14-17, Paris, France, 2008 Pages: 484-487''		** [4] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://dx.doi.org/10.1109/ISBI.2008.4541038 Chromosome pairing for karyotyping purposes using mutual information], ''Proceedings of the 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 14-17, Paris, France, 2008 Pages: 484-487''



	== Lisbon-K1 Chromosome Dataset ==		== Lisbon-K1 Chromosome Dataset ==

Artkhmelinskii at 08:18, 4 February 2011

2011-02-04T08:18:53Z

← Older revision		Revision as of 08:18, 4 February 2011
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	** [1] Rodrigo Ventura, Artem Khmelinskii and João Sanches, [http://ieeexplore.ieee.org Classifier-assisted metric for chromosome pairing], ''Proceedings of the 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 31-September 4, Buenos Aires, Argentina, 2010 Pages: 6729-6732''		** [1] Rodrigo Ventura, Artem Khmelinskii and João Sanches, [http://ieeexplore.ieee.org Classifier-assisted metric for chromosome pairing], ''Proceedings of the 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 31-September 4, Buenos Aires, Argentina, 2010 Pages: 6729-6732''
	** '''[2]''' Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=10 '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010''		** '''[2]''' Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=10 '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010''
	** [3] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4636107 ~~'''~~Automatic chromosome pairing using mutual information~~'''~~], ''Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 20-24, Vancouver, Canada, 2008, Pages: 1918-1921''		** [3] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4636107 Automatic chromosome pairing using mutual information], ''Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 20-24, Vancouver, Canada, 2008, Pages: 1918-1921''
	** [4] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4534844 ~~'''~~Chromosome pairing for karyotyping purposes using mutual information~~'''~~], ''Proceedings of the 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 14-17, Paris, France, 2008 Pages: 484-487''		** [4] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4534844 Chromosome pairing for karyotyping purposes using mutual information], ''Proceedings of the 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 14-17, Paris, France, 2008 Pages: 484-487''

Artkhmelinskii at 08:18, 4 February 2011

2011-02-04T08:18:14Z

← Older revision		Revision as of 08:18, 4 February 2011
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	* References:		* References:
	** [1] Rodrigo Ventura, Artem Khmelinskii and João Sanches, [http://ieeexplore.ieee.org ~~'''~~Classifier-assisted metric for chromosome pairing~~'''~~], ''Proceedings of the 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 31-September 4, Buenos Aires, Argentina, 2010 Pages: 6729-6732''		** [1] Rodrigo Ventura, Artem Khmelinskii and João Sanches, [http://ieeexplore.ieee.org Classifier-assisted metric for chromosome pairing], ''Proceedings of the 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 31-September 4, Buenos Aires, Argentina, 2010 Pages: 6729-6732''
	** '''[2]''' Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=10 '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010''		** '''[2]''' Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=10 '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010''
	** [3] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4636107 '''Automatic chromosome pairing using mutual information'''], ''Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 20-24, Vancouver, Canada, 2008, Pages: 1918-1921''		** [3] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4636107 '''Automatic chromosome pairing using mutual information'''], ''Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 20-24, Vancouver, Canada, 2008, Pages: 1918-1921''

Artkhmelinskii at 08:17, 4 February 2011

2011-02-04T08:17:27Z

← Older revision		Revision as of 08:17, 4 February 2011
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	* References:		* References:
	** [1] Rodrigo Ventura, Artem Khmelinskii and João Sanches, [http://ieeexplore.ieee.org '''Classifier-assisted metric for chromosome pairing'''], ''Proceedings of the 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 31-September 4, Buenos Aires, Argentina, 2010 Pages: 6729-6732''		** [1] Rodrigo Ventura, Artem Khmelinskii and João Sanches, [http://ieeexplore.ieee.org '''Classifier-assisted metric for chromosome pairing'''], ''Proceedings of the 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 31-September 4, Buenos Aires, Argentina, 2010 Pages: 6729-6732''
	** '''[2] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=10 '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010~~'''~~''		** '''[2]''' Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=10 '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010''
	** [3] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4636107 '''Automatic chromosome pairing using mutual information'''], ''Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 20-24, Vancouver, Canada, 2008, Pages: 1918-1921''		** [3] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4636107 '''Automatic chromosome pairing using mutual information'''], ''Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 20-24, Vancouver, Canada, 2008, Pages: 1918-1921''
	** [4] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4534844 '''Chromosome pairing for karyotyping purposes using mutual information'''], ''Proceedings of the 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 14-17, Paris, France, 2008 Pages: 484-487''		** [4] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4534844 '''Chromosome pairing for karyotyping purposes using mutual information'''], ''Proceedings of the 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 14-17, Paris, France, 2008 Pages: 484-487''

Artkhmelinskii at 08:16, 4 February 2011

2011-02-04T08:16:43Z

← Older revision		Revision as of 08:16, 4 February 2011
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	* References:		* References:
	** [1] Rodrigo Ventura, Artem Khmelinskii and João Sanches, [http://ieeexplore.ieee.org '''Classifier-assisted metric for chromosome pairing'''], ''Proceedings of the 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 31-September 4, Buenos Aires, Argentina, 2010 Pages: 6729-6732''		** [1] Rodrigo Ventura, Artem Khmelinskii and João Sanches, [http://ieeexplore.ieee.org '''Classifier-assisted metric for chromosome pairing'''], ''Proceedings of the 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 31-September 4, Buenos Aires, Argentina, 2010 Pages: 6729-6732''
	** [2] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=10 '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010''		** '''[2] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=10 '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010'''''
	** [3] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4636107 '''Automatic chromosome pairing using mutual information'''], ''Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 20-24, Vancouver, Canada, 2008, Pages: 1918-1921''		** [3] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4636107 '''Automatic chromosome pairing using mutual information'''], ''Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 20-24, Vancouver, Canada, 2008, Pages: 1918-1921''
	** [4] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4534844 '''Chromosome pairing for karyotyping purposes using mutual information'''], ''Proceedings of the 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 14-17, Paris, France, 2008 Pages: 484-487''		** [4] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4534844 '''Chromosome pairing for karyotyping purposes using mutual information'''], ''Proceedings of the 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 14-17, Paris, France, 2008 Pages: 484-487''

Artkhmelinskii at 08:13, 4 February 2011

2011-02-04T08:13:12Z

← Older revision		Revision as of 08:13, 4 February 2011
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	* References:		* References:
	** [1] Rodrigo Ventura, Artem Khmelinskii and João Sanches, [http://ieeexplore.ieee.org '''Classifier-assisted metric for chromosome pairing'''], ''Proceedings of the 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 31-September 4, Buenos Aires, Argentina, 2010 Pages: ~~????~~''		** [1] Rodrigo Ventura, Artem Khmelinskii and João Sanches, [http://ieeexplore.ieee.org '''Classifier-assisted metric for chromosome pairing'''], ''Proceedings of the 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 31-September 4, Buenos Aires, Argentina, 2010 Pages: 6729-6732''
	** [2] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=10 '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010''		** [2] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=10 '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010''
	** [3] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4636107 '''Automatic chromosome pairing using mutual information'''], ''Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 20-24, Vancouver, Canada, 2008, Pages: 1918-1921''		** [3] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4636107 '''Automatic chromosome pairing using mutual information'''], ''Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 20-24, Vancouver, Canada, 2008, Pages: 1918-1921''
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	In the future, another dataset will be build with more "real" and interesting data. i.e., karyograms extracted from cancerous cells of Leukemia patients, with all sort of chromosomal numerical and structural abnormalities.		In the future, another dataset will be build with more "real" and interesting data. i.e., karyograms extracted from cancerous cells of Leukemia patients, with all sort of chromosomal numerical and structural abnormalities.



	<!-- == Software ==		<!-- == Software ==

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	* Output: Cell array with the 46 chromosomes, rightly ordered		* Output: Cell array with the 46 chromosomes, rightly ordered
	-->		-->

Artkhmelinskii at 08:11, 4 February 2011

2011-02-04T08:11:11Z

← Older revision		Revision as of 08:11, 4 February 2011
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	== Software ==		<!-- == Software ==


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	* Input: Karyogram image		* Input: Karyogram image
	* Output: Cell array with the 46 chromosomes, rightly ordered		* Output: Cell array with the 46 chromosomes, rightly ordered
			-->

Artkhmelinskii at 12:49, 2 July 2010

2010-07-02T12:49:40Z

← Older revision		Revision as of 12:49, 2 July 2010
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	* References:		* References:
	** [1] Rodrigo Ventura, Artem Khmelinskii and João Sanches, [http://ieeexplore.ieee.org~~/xpl/RecentIssue.jsp?punumber=10~~ '''Classifier-assisted metric for chromosome pairing'''], ''Proceedings of the 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 31-September 4, Buenos Aires, Argentina, 2010 Pages: ????''		** [1] Rodrigo Ventura, Artem Khmelinskii and João Sanches, [http://ieeexplore.ieee.org '''Classifier-assisted metric for chromosome pairing'''], ''Proceedings of the 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 31-September 4, Buenos Aires, Argentina, 2010 Pages: ????''
	** [2] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=10 '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010''		** [2] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=10 '''A novel metric for bone marrow cells chromosome pairing'''], ''IEEE Transactions on Biomedical Engineering, Volume 57, Issue 6, Pages: 1420-1429, June 2010''
	** [3] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/~~RecentCon~~.jsp?punumber=4636107~~&conhome=1000269~~ '''Automatic chromosome pairing using mutual information'''], ''Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 20-24, Vancouver, Canada, 2008, Pages: 1918-1921''		** [3] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4636107 '''Automatic chromosome pairing using mutual information'''], ''Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, August 20-24, Vancouver, Canada, 2008, Pages: 1918-1921''
	** [4] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/~~RecentCon~~.jsp?punumber=4534844~~&conhome=1000080~~ '''Chromosome pairing for karyotyping purposes using mutual information'''], ''Proceedings of the 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 14-17, Paris, France, 2008 Pages: 484-487''		** [4] Artem Khmelinskii, Rodrigo Ventura and João Sanches, [http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=4534844 '''Chromosome pairing for karyotyping purposes using mutual information'''], ''Proceedings of the 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 14-17, Paris, France, 2008 Pages: 484-487''