Lisbon-K Chromosome Dataset: Difference between revisions
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In the future, another dataset will be build with more "real" and interesting data. i.e., karyograms extracted from cancerous cells of Leukemia patients, with all sort of chromosomal numerical and structural abnormalities. | In the future, another dataset will be build with more "real" and interesting data. i.e., karyograms extracted from cancerous cells of Leukemia patients, with all sort of chromosomal numerical and structural abnormalities. | ||
== Dataset Request == | == Dataset Request & Citing == | ||
In order to follow-up the investigation interest in this area we ask the researchers interested in this dataset to send us an e-mail, with a brief description of your work (one, two paragraphs would be more than enough) and the institute/research center you are affiliated to. A temporary download link will be send to you in the next few hours following the e-mail reception. | In order to follow-up the investigation interest in this area we ask the researchers interested in this dataset to send us an e-mail, with a brief description of your work (one, two paragraphs would be more than enough) and the institute/research center you are affiliated to. A temporary download link will be send to you in the next few hours following the e-mail reception. | ||
Thank you and good work! | Thank you and good work! | ||
== Contact == | == Contact == | ||
Revision as of 13:38, 29 July 2008
Under Construction...
Background & Framework
Lisbon-K1 Chromosome Dataset
Description:
- 200 karyograms:
- 100 "Good/Medium"
- INSERIR NÚMERO Female
- INSERIR NÚMERO Male
- 100 "Bad" quality karyograms
- INSERIR NÚMERO Female
- INSERIR NÚMERO Male
- 100 "Good/Medium"
- Origin: bone marrow cells collected from patients with Leukemia
- All the karyograms were selected fulfilling the following criteria:
- No structural abnormalities (such as translocations, deletions, inversions, etc.)
- No numerical abnormalities (such as monosomies or trisomies)
- No segmentation artifacts
- No artifacts related with chromosome overlapping in the metaphase plate
- All the chromosomes are correctly oriented
- Karyograms with very bended chromosomes were excluded (more than 50º)
- Without the chromosome straightening performed by the Leica software
- Total number of chromosomes: (100*46)*2=9200
Lisbon-K2 Chromosome Dataset (Under Construction...)
Description:
In the future, another dataset will be build with more "real" and interesting data. i.e., karyograms extracted from cancerous cells of Leukemia patients, with all sort of chromosomal numerical and structural abnormalities.
Dataset Request & Citing
In order to follow-up the investigation interest in this area we ask the researchers interested in this dataset to send us an e-mail, with a brief description of your work (one, two paragraphs would be more than enough) and the institute/research center you are affiliated to. A temporary download link will be send to you in the next few hours following the e-mail reception.
Thank you and good work!
Contact
Artem Khmelinskii
e-mail: artkhmelinskii (at) isr.ist.utl.pt